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Layers
Diffusion in heterogeneous environments
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Typedef for struct for passing parameters and arrays to mse function. More...
Data Fields | |
| int | nt |
| Number of support points in time. | |
| int | nd |
| Number of data points. | |
| int | nz |
| Number of support points in z (rows of concentration matrix). | |
| int | nr |
| Number of support points in r (columns of concentration matrix). | |
| int | iprobe |
| z-index of probe location. | |
| int | jprobe |
| r-index of probe location. | |
| int | iz1 |
| z-index of SR-SP boundary. | |
| int | iz2 |
| z-index of SP-SO boundary. | |
| int | nolayer |
| Flag for no layer (homogenous environment). | |
| int | opt_global_kappa |
| True if user specifies that kappa be the same in all layers. | |
| double | dt |
| Spacing in time. | |
| double | dr |
| Spacing in r (in this program, same as spacing in z). | |
| double | sd |
| Source delay (time before source starts). | |
| double | st |
| Duration of source. | |
| double | alpha_so |
| Extracellular volume fraction in SO layer. | |
| double | theta_so |
| Permeability in SO layer. | |
| double | kappa_so |
| Nonspecific clearance factor in SO layer. | |
| double | alpha_sp |
| Extracellular volume fraction in SP layer. | |
| double | theta_sp |
| Permeability in SP layer. | |
| double | kappa_sp |
| Nonspecific clearance factor in SP layer. | |
| double | alpha_sr |
| Extracellular volume fraction in SR layer. | |
| double | theta_sr |
| Permeability in SR layer. | |
| double | kappa_sr |
| Nonspecific clearance factor in SR layer. | |
| double | minalpha |
| Lower boundary for alpha_sp (add penalty if alpha_sp is out of bounds). | |
| double | maxalpha |
| Upper boundary for alpha_sp (add penalty if alpha_sp is out of bounds). | |
| double | mintheta |
| Lower boundary for theta_sp (add penalty if theta_sp is out of bounds). | |
| double | maxtheta |
| Upper boundary for theta_sp (add penalty if theta_sp is out of bounds). | |
| double | minkappa |
| Lower boundary for kappa_sp (add penalty if kappa_sp is out of bounds). | |
| double | maxkappa |
| Upper boundary for kappa_sp (add penalty if kappa_sp is out of bounds). | |
| double | dfree |
| Free diffusion coefficient. | |
| double * | t |
| Time array for model. | |
| double * | s |
| Source array. | |
| double * | invr |
| Array of 1/r values. | |
| double * | t_data |
| Time array for data. | |
| double * | p_data |
| Probe concentration data. | |
| double * | p |
| Probe concentration calculated from model. | |
Typedef for struct for passing parameters and arrays to mse function.
Definition at line 55 of file fit-layer.c.
1.8.11
